All functions
assembly_parameters	Helper function for creating parameter objects
bounds check_bounds bounds_infinite check_point	Trait bounds
build_schedule	Build Cohort Schedule
carrying_capacity	Carrying Capacity
check_inviable	Check low-abundance strategies for viability
clamp_domain	Clamp function to domain
cohort_schedule_times_default	Generate Default Cohort Introduction Times
CohortSchedule	Schedule of cohort introduction times
Control	Control parameters
Disturbance	Disturbance control object
Environment make_environment	Environment object
equilibrium_seed_rain	Run system to seed rain equilibrium
equilibrium_verbose equilibrium_quiet	Noisy Parameters for Equilibrium Finding
expand_parameters	Expand Parameters to include mutants
fast_control	Fast Control Defaults
make_FF16_hyperpar FF16_hyperpar FF16r_hyperpar	Hyperparameters for FF16 physiological model
FF16_Strategy	Strategy parameters
FF16_Plant FF16_Cohort FF16_Species FF16_Parameters FF16_Patch FF16_SCM FF16_StochasticSpecies FF16_StochasticPatch FF16_StochasticPatchRunner FF16_PlantPlus	Create a FF16 Plant or Cohort
FF16r_Strategy	Strategy parameters
FF16r_Plant FF16r_Cohort FF16r_Species FF16r_Parameters FF16r_Patch FF16r_SCM FF16r_StochasticSpecies FF16r_StochasticPatch FF16r_StochasticPatchRunner FF16r_PlantPlus	Create a FF16r Plant or Cohort
fitness_landscape	Fitness Landscape
fixed_environment	Create fixed light environment
grow_plant_to_size grow_plant_to_height	Grow plant to given size
grow_plant_to_time	Grow a plant
make_hyperpar hyperpar	Hyperparameters for FF16 physiological model
Interpolator	Spline interpolation
lcp_whole_plant	Whole plant light compensation point
make_patch scm_state scm_patch	Reconstruct a patch
make_reference_plant_FF16	Reference Growth Model
make_reference_plant	Reference Growth Model
make_scm_integrate	Integrate SCM variables
make_transparent	Make colours transparent
max_fitness	Find point of maximum fitness within some range.
max_growth_rate	Compute Max Growth Rate
nlsolve	Thin wrapper around nleqslv and dfsane
OdeControl	ODE Control parameters
plant_log_console	Activate logging with loggr
Plant	Plant object
PlantPlus	PlantPlus object
QK	Gauss-Kronrod Quadrature
rbind_list cbind_list	Create matrices from lists
run_scm_collect	Run the SCM, Collecting Output
run_scm	Run SCM
run_stochastic_collect	Run a stochastic patch, Collecting Output
scm_base_parameters	Sensible, fast (ish) SCM parameters
seq_log seq_log_range seq_range	Sequence in log space
splinefun_log splinefun_loglog	Spline interpolation in log-x space
strategy_list strategy_default strategy plant_list	Create a list of Strategies
trait_matrix	Create trait matrix
validate	Validate an object
viable_fitness	Compute Region of Positive Fitnes